Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869081.1_cds_XP_016433654.1_29791
CDS Infomation

[gene=LOC107760153] [db_xref=GeneID:107760153] [protein=ninja-family protein mc410-like] [protein_id=XP_016433654.1] [location=complement(join(5775..6274,10352..11384))] [gbkey=CDS]
Sequence

ATGGACGAAAACGGTCTTGATCTGAGCTTAGGTCTGCCCTGTGGTGGAGGGGCTGCCTCC
GAGAAAAGTAAAAGTGGGAGCTCATCGGATTCTAAGGTTGAGGAAGTTGATAGAGATGGC
AAGGTGATCAATGATTTCAAGAACTTTCTGGATGGAAGCACTAGCAGCCAAAAACATGAT
TCTGGTGTGGGTTCTCAGAGAAGTGATTCAACAAAACATGAGGGGAACTTGCTCCCCAGC
ATTAGTGTTGACGTAGATGCTTCTAAAAAGTTAAATAGTGGAGGATTCTGGGTTCAAAAT
GATAGTAGACCTATAGAAGTTGAAGAAGATAGGAGAGCTGATGTGGGTGACAAACGTAAA
AATCTGTTCAGGGAGTCAAGTCAACAGAAGAAGCAAGAGAGAGAAGGTCATCATGCTGAT
ACGCATGACAAGACCAGGGCATCACACATTTCAATAACCACAGATGAAGGTTCGACTGCA
GAAAATGAAGATGTAGCTGATTCTGAAACTGTGGGTTCAACATCCAGGCAAATTTTGCAG
CATGATGAGAGCTCCAAGAGATTTGTTGGAAGTAGTGGTTTAGCTGAGGTTCATAAGGAG
CTTCGCAGTGTTCCGTCTTCAAGTGGTGTAGAATTAATAGGACACAGAAGGTTTACTATT
TCTTCAGAGAAGGATGTTAAGTTTAGGAATATACCATATACTATCCCATTCCAGGGCCAA
TCAATAAACATCATGAACCTGCCTTACTCTATGCCTCTGAATTCTAACACTGCTGGTACA
ACAAGTACGCCTAGTTACCCAATTCCTGGCATGATGCAAGTGATGGCTACCACAAGTGGA
GATAGACCAGGAAGCCAGCCTGTCATACCTGCAAACTTGCCATTAATGTTTGGCTACTCT
TCTGTACAGCTTCCAACATTGGACGAGGATAACCTCCGCGGTGTGGCTTCTCATCTTCAA
CAGCTTCACCCTTCCCATGGAAGAGGTCCTCTGGGCTCAGATATGCAGAAAGATGGACCA
AATATTTCTCAAGCTACTACGTCATCTATTCCGCACAAGTCATCTGATTCTGTACAATAT
GATGGGAGGGCAATGGAGCATGTGAAAGGCAATGGGAGACAGCATAAGGCAGAAGAAACT
TCCACTTCTCGAGGGGAAGAAAATGTGAAAGGAAGCAACATAAGCTTCAGGGCAAAAGAC
CCTCCTGAGCAGCCCAGAGCAGAAGCAGTTCCTTCTGAATTTTCAACTATAAGGCCAGGT
CTTGCTGCAGATTTGAAATTTGGAGGATCTGGTTCCTACCCGAACCTTCCGTGGGTCTCA
ACGACTGGTCCTGGTCCAAATGGTAGAACAATATCTGGTGTTACTTACAGATACAGTTCC
ACCCAAATCAGGATTGTCTGTGCTTGTCATGGGTCTCACATGTCACCAGATGACTTTGTG
CGGCATGCAAGCGTAGAGCAAACTAGTCAAGAACCTGGCACTGGGGTTTCATCATTTCCA
AGTAGCAATCCGGCTGCCTCTGCCCAAAGCTGA

Peptide Sequence

PEP ID

XP_016433654.1
PEP Infomation

PREDICTED: ninja-family protein mc410-like [Nicotiana tabacum]
Sequence

MDENGLDLSLGLPCGGGAASEKSKSGSSSDSKVEEVDRDGKVINDFKNFLDGSTSSQKHD
SGVGSQRSDSTKHEGNLLPSISVDVDASKKLNSGGFWVQNDSRPIEVEEDRRADVGDKRK
NLFRESSQQKKQEREGHHADTHDKTRASHISITTDEGSTAENEDVADSETVGSTSRQILQ
HDESSKRFVGSSGLAEVHKELRSVPSSSGVELIGHRRFTISSEKDVKFRNIPYTIPFQGQ
SINIMNLPYSMPLNSNTAGTTSTPSYPIPGMMQVMATTSGDRPGSQPVIPANLPLMFGYS
SVQLPTLDEDNLRGVASHLQQLHPSHGRGPLGSDMQKDGPNISQATTSSIPHKSSDSVQY
DGRAMEHVKGNGRQHKAEETSTSRGEENVKGSNISFRAKDPPEQPRAEAVPSEFSTIRPG
LAADLKFGGSGSYPNLPWVSTTGPGPNGRTISGVTYRYSSTQIRIVCACHGSHMSPDDFV
RHASVEQTSQEPGTGVSSFPSSNPAASAQS

Transcript Sequence

Gene sequence data has not been registered.